An impactful chapter to say the least, we finally see the real Yui Ikari and she says a favorite line of mine about no matter where he is, as long as Shinji is alive he can be happy. Just like in the anime Misato screams at Eva 01 "Give him back!". Here, though, it seems Rei is responsible for his return. The discourse between her and 01 really seems to hint at her and 01's true nature.
Phaetons_Folly said:
the Eva appear to be two different entities occupying the same space.
Yeah, I thought that was interesting to. I've always thought they are one and the same. Actually, I still think they are it's just the Eva represents her not wanting to let him go.